PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os04g46240.1
Common NameLOC107277426, Os04g0547500, OSJNBa0065H10.2, OSJNBa0079A21.17, OSNPB_040547500
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 319aa    MW: 33819.7 Da    PI: 4.8782
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os04g46240.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.4e-20139190256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       +y+GVr+++ +g+++AeIrdp+ +g   r++lg+++t+ eAa+a+++a+ +++g+
  LOC_Os04g46240.1 139 KYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTYDTPVEAARAYDRAAFRMRGA 190
                       8********.**********96554..**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.6E-32138198IPR001471AP2/ERF domain
CDDcd0